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Tensorflow
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PyTorch
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Keras
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药物设计

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材料科学
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经济学与金融学
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图神经网络
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PyG spektral DGL 图卷积网络 图注意力网络
图自编码器 图生成网络 图时空网络 图神经网路与药物设计 图网络数据
 Graphormer        

1. Identifying drug–target interactions based on graph convolutional network and deep neural network pdf
2. Geometric deep learning on graphs and manifolds using mixture model CNNs pdf
3. WideDTA: prediction of drug-target binding affinity pdf

 

4. Graph neural networks for automated de novo drug design. DRUG DISCOVERY TODAY. JUN 2021 pdf
5. Designing optimized drug candidates with Generative Adversarial Network. JOURNAL OF CHEMINFORMATICS. Jun 26 2022 pdf
6. Graph networks for molecular design. MACHINE LEARNING-SCIENCE AND TECHNOLOGY. JUN 2021 pdf

 

7. FP-GNN: a versatile deep learning architecture for enhanced molecular property prediction. BRIEFINGS IN BIOINFORMATICS. Sep 2022 pdf
8. Sequence-based drug-target affinity prediction using weighted graph neural networks. BMC GENOMICS. Jun 17 2022 pdf
9. Multiphysical graph neural network (MP-GNN) for COVID-19 drug design. BRIEFINGS IN BIOINFORMATICS. Jul 18 2022 pdf

 

10. Prediction of Drug-Drug Interaction Using an Attention-Based Graph Neural Network on Drug Molecular Graphs.MOLECULES. May 2022 pdf
11. Directed graph attention networks for predicting asymmetric drug-drug interactions. BRIEFINGS IN BIOINFORMATICS. May 13 2022 pdf

12. Molecular contrastive learning of representations via graph neural networks.NATURE MACHINE INTELLIGENCE. Mar 2022 pdf

 

13. Utilizing graph machine learning within drug discovery and development. BRIEFINGS IN BIOINFORMATICS. Nov 2021 pdf
14. Molecular generative Graph Neural Networks for Drug Discovery.NEUROCOMPUTING .Aug 25 2021 pdf
15. Introducing block design in graph neural networks for molecular properties prediction. CHEMICAL ENGINEERING JOURNAL. JUN 15 2021 pdf

 

16. BonDNet: a graph neural network for the prediction of bond dissociation energies for charged molecules. CHEMICAL SCIENCE. FEB 7 2021 pdf
17. DeepAtomicCharge: a new graph convolutional network-based architecture for accurate prediction of atomic charges.BRIEFINGS IN BIOINFORMATICS. 2021-05-20 pdf

18. Generative machine learning for de novo drug discovery: A systematic review. Computers in Biology and Medicine 2022, pdf

 

 
 
 

 

图神经网络

什么是图神经网路,一下讲不清楚。

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