======================
Bat SARS-like Genomes
======================
========
Genomes
========
=======
Data
=======

 

Beta Coronaviru

1 WIV1Sep-2012,Zhengli Shi)RSin

2. BM48-31/BGR/2008 ( Ref. Seq., Bulgaria,20018) RBla

3. CovZXC21 :MG772934 (舟山,Weilong Tan, Jul-2015)RSin

4. CoVZC45 :MG772933 (舟山,Weilong Tan, Jul-2015)RSin

5. Rp32004,Zhengli Shi, Science 2005)

6. Rm12004,Zhengli Shi, Science 2005)RMac

7. Rf12004,Zhengli Shi, Science 2005)

8. HKU3-1

9. HKU3-263.

10. HKU3-3

11. HKU3-4

12. HKU3-5

13. HKU3-6 (Hong Kong University Patrick C. Y. Woo,Kwok-Yung Yuen,2009)

14. HKU3-7

15. HKU3-8 (Hong Kong University Patrick C. Y. Woo,Kwok-Yung Yuen,2009)

16. HKU3-9

17. HKU3-10

18. HKU3-11

19. HKU3-12 (Hong Kong University Patrick C. Y. Woo,Kwok-Yung Yuen,2009)

20. HKU3-13

21. HKU4-1 (Ref.Seq., Yuen,K.Y., 18-OCT-2006sub)

22. HKU5-1(Ref.Seq., Yuen,K.Y., 18-OCT-2006sub)

23. HKU9-1 (Ref.Seq., Woo,P.C., 20-FEB-2007sub)

24.HKU9-2

25.HKU9-3

26.HKU9-4

27.HKU9-5-1

28.HKU9-5-2

29.HKU9-10-1

30.HKU9-10-2

31. BtCoV/273/2005 (Yi Guan,2005,Hong Kong University)

32. BtCoV/279/2005 (Yi Guan,2005,Hong Kong University)

33. YNLF_31C23-May-2013,Hong Kong University,Zhang,H.-L. )

34. YNLF_34C ( 23-May-2013, Woo,P.C.Y., )

35. As652612-May-2014,Zhengli Shi)ASto

36. RsSHC01417-Apr-2011,Zhengli Shi)RSin

37. Rs672 (2006,Zhengli Shi)RSin

38. Rs336719-Mar-2012,Zhengli Shi)RSin

39. Rs4081 (18-Sep-2012, Zhengli Shi)RSin

40. Rs408418-Sep-2012,Zhengli Shi)RSin

41. Rf4092 (Zhengli Shi, 18-Sep-2012

42. Rs423117-Apr-2013,Zhengli Shi)RSin

43. Rs423717-Apr-2013,Zhengli Shi)RSin

44. Rs424717-Apr-2013,Zhengli Shi)RSin

45. Rs425517-Apr-2013,Zhengli Shi)RSin

46. Rs4874 (Zhengli Shi, 21-Jul-2013)RSin

47. Rs7327 (Bat,24-Oct-2014,Zhengli Shi)RSin

48. Rs9401 (Zhengli Shi,16-Oct-2015)RSin

 

 

49. BtRs-BetaCoV/YN2013 (2013, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)RSin

50. BtRs-BetaCoV/GX2013 (2013, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)RSin

51. BtRs-BetaCoV/HuB2013 (2013, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)RSin

52. BtRf-BetaCoV/JL2012 (2012, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

53.BtRf-BetaCoV/HeB2013 (2013, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

54. BtRf-BetaCoV/SX2013 (2013, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

55. Cp/Yunnan2011 (2011, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

56. Rp/Shaanxi2011 (2011, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

57. Longquan-140 ( 2012, ChinaCDC,Zhang,Y.-Z.)

58. BtHpCoV-ZJ13 (Ref. seq, 29-Apr-2013, Jin,Q.)

59. Rousettus bat coronavirus GCCDC1 (Ref.Seq.,Gao,G.F., 25-FEB-2016sub)

60.LYRa11 (2011)

61.WIV16 (Zhengli Shi,21-Jul-2013)RSin

62. BtRs-BetaCoV/YN2018A (Wu, Z., Sep-2016)

63. BtRs-BetaCoV/YN2018B (Wu, Z., Sep-2016)

64. BtRs-BetaCoV/YN2018C (Wu, Z., Sep-2016)

65. BtRs-BetaCoV/YN2018D (Wu, Z., Sep-2016)

66.Bat-CoV/H.savii/Italy/206645-40/2011,

67.Bat-CoV/P.khulii/Italy/206645-63/2011,

(68-71 Alpha or Beta Coronavirus)

68. RaTG13 (24-Jul-2013,)Zhengli Shi)

69. JTMC15 Institute of Military Veterinary Medicine, Academy of Military Medical Sciences,Changchun Tu,Aug-2013

70. 16BO133 (South Korea,17-Apr-2016

71.Hp-betacoronavirus/Zhejiang2013 (Ref. Seq., China, 29-Apr-2013, Jin,Q.)

72. Anlong-112, (2013, Zhang,Y.Z.)RSin

73. Anlong-103, RSin

74. Jiyuan-84 (2012, Zhang,Y.Z.)

75. BtRt-BetaCoV/GX2018

======================

pShuttle-SN

Alpha Coronavirus

1. BtMiCoV-1 reference Seq. (Chu,D.K.,23-JAN-2008sub)

2. HKU2 (Ref. Seq., Zheng,B.J,2006)

3.HKU10Ref. Seq., Lau,S.K.P, Oct-2005

4. Bat coronavirus HKU8 (Ref. Seq., )(Chu,D.K.W.,23-JAN-2008sub)

5. BtRf-AlphaCoV/HuB2013 (2013, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

6. BtRf-AlphaCoV/YN2012 2012,Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

7. BtRf-AlphaCoV/HuB2013 (2013, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

8. BtMr-AlphaCoV/SAX2011Ref. Seq., 2011, Jin,Q.)

9. BtNv-AlphaCoV/SC2013Ref.Seq., 2013,Jin,Q.)

10. BtRf-AlphaCoV/YN2012 (2012, Qi Jin,Institute of Pathogenic Biology, Academy of Medical Sciences)

11. HKU10: TLC1347A (Aug-2010, Patrick C. Y. Woo)

12. CDPHE15 (Ref. Seq., 07-Aug-2006)

13. Scotophilus bat coronavirus 512ref. seq, 2005, Guan,Y)

14. BtKYNL63-9a (Ref. Seq., 21-Jun-2010, Tong,S.) NL63-related

15. NL63-related bat coronavirus strain BtKYNL63-9b

(Kenya,Tong,S., 21-Jun-2010

16.HKU32 strain TLC28A RSin

17.HKU32 strain TLC26A RSin

18. 1A Ref.Seq., Guan,Y. , 12-MAR-2008sub)

Classification of bats
Rhinolophus affinis (RAff) 中菊头蝠
Rhinolophus pearsonii (RPea) 皮氏菊头蝠
Rhinolophus ferrumequinum (RFer) 马铁菊头蝠
Rhinolophus pusillus (RPus) 菲菊头蝠
Aselliscus stoliczkanus (ASto) 三叶蹄蝠
Rhinolophus blasii (RBla) 布腊氏菊头蝠
Rhinolophus sinicus (RSin) 中华菊头蝠
Rhinolophus rex (RRex) 贵州菊头蝠
Rhinolophus macrotis (RMac) 大耳菊头蝠
Rhinolophus monoceros (RMon) 单角菊头蝠; 台湾小蹄鼻蝠
Rhinolophus thomasi (RTho) 托氏菊头蝠
   

 

 

Bat

Bats (scientific name: Chiroptera) are a class of animals under the chordate phylum, Mammalia, and are the only mammals that can really fly in mammals; bats are natural hosts for a variety of zoonotic viruses, and can carry dozens of viruses, Not edible. Bats can be divided into two suborders. There are 962 species in 185 genera and 16 families in the world, and 120 species in 30 genera and 7 families in China.

 

 

 

No. 999 Hucheng Ring Road, Pudong New District, Shanghai, China